PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN23398.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 349aa    MW: 38528.4 Da    PI: 5.0013
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN23398.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.9e-13109160155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 ++++h  +Er+RR+++N+ +  Lr+l+P     + k+ + a+i   +v+YI++Lq
  KHN23398.1 109 QKMSHITVERNRRKQMNEHLTVLRSLMPCF---YVKRGDQASIIGGVVDYISELQ 160
                 6899*************************9...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.89E-14106164No hitNo description
SuperFamilySSF474592.62E-17107177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.989108159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.3E-13108164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-10109160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10114165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MDDNSLCDIF DDKEFGSDHF GGDDLFAILE SLESDFTTDF PPLINEEAVV AAAVSKDINN  60
EDVSRLVSQK STSSSAPLDS ETELETSPKT KRQKLTPTTP EEANPDGQQK MSHITVERNR  120
RKQMNEHLTV LRSLMPCFYV KRGDQASIIG GVVDYISELQ QVLQALEAKK QRKVYCEVLS  180
PRLVSSPRPS PLSPRKPPLS PRLNLPISPR TPQPGSPYRP RLHQQQHGYN NIISPTISNV  240
SLDPSPTSSA NSSINDNINE LVANSKSPTA DVEVKFSGPH VLLKTVSQRI PGQALKIITA  300
LEDLALEIVH VNINCAADDT MLNSFTIKIG IECQLSAEEL AQQIQQTFY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003527974.10.0PREDICTED: transcription factor SPEECHLESS-like
SwissprotQ700C71e-109SPCH_ARATH; Transcription factor SPEECHLESS
TrEMBLA0A0B2QUC60.0A0A0B2QUC6_GLYSO; Transcription factor SPEECHLESS
TrEMBLK7KUR30.0K7KUR3_SOYBN; Uncharacterized protein
STRINGGLYMA06G13081.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36863463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.16e-98bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]